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1

Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks

Rule, Adam, Birmingham, Amanda, Zuniga, Cristal, Altintas, Ilkay, Huang, Shih-Cheng, Knight, Rob, Moshiri, Niema, Nguyen, Mai H., Rosenthal, Sara Brin, Pérez, Fernando, Rose, Peter W., Lewitter, Fran

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 420 KB

english, 2019

2

Longitudinal association between infant disorganized attachment and childhood posttraumatic stress symptoms

Macdonald, Helen Z., Beeghly, Marjorie, Grant-Knight, Wanda, Augustyn, Marilyn, Woods, Ryan W., Cabral, Howard, Rose-Jacobs, Ruth, Saxe, Glenn N., Frank, Deborah A.

Journal:

Development and Psychopathology

Year:

2008

Language:

english

File:

PDF, 147 KB

english, 2008

3

Posttraumatic stress disorder in disaster relief workers following direct and indirect trauma exposure to Ground Zero

Rose Zimering, Suzy B. Gulliver, Jeffrey Knight, James Munroe, Terence M. Keane

Journal:

Journal of Traumatic Stress

Year:

2006

Language:

english

File:

PDF, 92 KB

english, 2006

4

Molecular bases of genetic diversity and evolution of the immunoglobulin heavy chain variable region (IGHV) gene locus in leporids

Ana Pinheiro, Dennis Lanning, Paulo C. Alves, Rose G. Mage, Katherine L. Knight, Wessel van der Loo, Pedro J. Esteves

Journal:

Year:

2011

Language:

english

File:

PDF, 945 KB

english, 2011

5

B cell and antibody repertoire development in rabbits: The requirement of gut-associated lymphoid tissues

Rose G. Mage, Dennis Lanning, Katherine L. Knight

Journal:

Developmental & Comparative Immunology

Year:

2006

Language:

english

File:

PDF, 316 KB

english, 2006

6

[American Institute of Aeronautics and Astronautics 43rd AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference - Denver, Colorado (22 April 2002 - 25 April 2002)] 43rd AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference - Finite Element Modeling of the Buckling Response of Sandwich Panels

Rose, Cheryl, Moore, David, Knight, Norman, Rankin, Charles

Year:

2002

Language:

english

File:

PDF, 531 KB

english, 2002

7

Longitudinal association between infant disorganized attachment and childhood posttraumatic stress symptoms

Macdonald, Helen Z., Beeghly, Marjorie, Grant-Knight, Wanda, Augustyn, Marilyn, Woods, Ryan W., Cabral, Howard, Rose-Jacobs, Ruth, Saxe, Glenn N., Frank, Deborah A.

Journal:

Development and Psychopathology

Year:

2008

Language:

english

File:

PDF, 32 KB

english, 2008

8

Ancient Greek Religion

Knight, W. F. J., Rose, H. J.

Journal:

The Journal of Hellenic Studies

Year:

1949

Language:

english

File:

PDF, 303 KB

english, 1949

9

The use of the USDA Nutrient Analysis Protocol in the evaluation of child-care menus in North Mississippi

Knight, Kathy B., Hickey, Rose, Aloia, Christopher R., Oakley, Charlotte B., Bomba, Anne K.

Journal:

Early Child Development and Care

Year:

2015

Language:

english

File:

PDF, 85 KB

english, 2015

10

No Right to Choose

Rose Knight, Madeleine Simms, Ann Kingsbury, Raewin Stone, Gwyn Vorhaus and Eileen Fairweather

Journal:

Feminist Review

Year:

1980

Language:

english

File:

PDF, 3.06 MB

english, 1980

11

Spectral Analysis of Point Processes

ROSE, WILLIAM, KNIGHT, CHRISTOPHER A.

Journal:

Medicine & Science in Sports & Exercise

Year:

2011

Language:

english

File:

PDF, 1.32 MB

english, 2011

12

What agricultural practices are most likely to deliver ‘sustainable intensification’ in the UK?

Dicks, L V, Rose, D C, Ang, F, Aston, S, Birch, A N E, Boatman, N, Bowles, L, Chadwick, D, Dinsdale, A, Durham, S, Elliott, J, Firbank, L, Humphreys, S, Jarvis, P, Jones, D, Kindred, D, Knight, S M, L

Journal:

Food and Energy Security

Year:

2018

Language:

english

File:

PDF, 1.11 MB

english, 2018

13

Disaster mental health workers responding to ground zero: One year later

Erin Scott Daly, Suzy Bird Gulliver, Rose T. Zimering, Jeffrey Knight, Barbara W. Kamholz, Sandra B. Morissette

Journal:

Journal of Traumatic Stress

Year:

2008

Language:

english

File:

PDF, 68 KB

english, 2008

14

Second-trimester diurnal variation of maternal serum alpha-fetoprotein, human chorionic gonadotropin, and unconjugated oestriol: Is it present and does it affect the prediction of a patient's risk for fetal down syndrome?

Nancy C. Rose, Jacob A. Canick, George J. Knight, Andrea Pulkkinen, M. B. Tumber, Michael T. Mennuti, Glenn E. Palomaki

Journal:

Prenatal Diagnosis

Year:

1994

Language:

english

File:

PDF, 328 KB

english, 1994

15

Ruthenium diphosphine complexes for catalysis; a general synthesis and direct comparisons with rhodium complexes

John M. Brown, Michael Rose, Frances I. Knight, Anette Wienand

Journal:

Recueil des Travaux Chimiques des Pays-Bas

Year:

1995

Language:

english

File:

PDF, 1.16 MB

english, 1995

16

Rabbit heavy chain haplotypes — Allotypic determinants expressed byVH-CHrecombinants

Rose G. Mage, Sheldon Dray, Alice Gilman-Sachs, Cécile Hamers-Casterman, Raymond Hamers, W. Carey Hanly, Thomas J. Kindt, Katherine L. Knight, William J. Mandy, Jan Naessen

Journal:

Year:

1982

Language:

english

File:

PDF, 662 KB

english, 1982

17

Transmission densitometry of stained nitrocellulose paper

Rose A. Maciewicz, Peter J. Knight

Journal:

Analytical Biochemistry

Year:

1988

Language:

english

File:

PDF, 769 KB

english, 1988

18

Interactive Effects of Harvest and Deer Herbivory on the Population Dynamics of American Ginseng

SUSAN J. FARRINGTON, ROSE-MARIE MUZIKA, DAN DREES, TIFFANY M. KNIGHT

Journal:

Conservation Biology

Year:

2009

Language:

english

File:

PDF, 650 KB

english, 2009

19

Social and Personal Factors as Predictors of Earthquake Preparation: The Role of Support Provision, Network Discussion, Negative Affect, Age, and Education

Kenneth Heller, Douglas B. Alexander, Margaret Gatz, Bob G. Knight, Tara Rose

Journal:

Journal of Applied Social Psychology

Year:

2005

Language:

english

File:

PDF, 1.33 MB

english, 2005

20

The stress-affiliation paradigm revisited: Do people prefer the kindness of strangers or their attractiveness?

Norman P. Li, Rose A. Halterman, Margaret J. Cason, George P. Knight, Jon K. Maner

Journal:

Personality and Individual Differences

Year:

2008

Language:

english

File:

PDF, 128 KB

english, 2008

21

Clinical exercise testing in the normal Thoroughbred racehorse

RJ ROSE, DK HENDRICKSON, PK KNIGHT

Journal:

Australian Veterinary Journal

Year:

1990

Language:

english

File:

PDF, 561 KB

english, 1990

22

Somatosensory evoked magnetic fields in patients with stroke

Edward L. Maclin, Douglas F. Rose, Jeanne E. Knight, William W. Orrison, Larry E. Davis

Journal:

Electroencephalography and Clinical Neurophysiology

Year:

1994

Language:

english

File:

PDF, 909 KB

english, 1994

23

The British Pleistocene fluvial archive: East Midlands drainage evolution and human occupation in the context of the British and NW European record

Andy J. Howard, David Bridgland, David Knight, John McNabb, Jim Rose, Danielle Schreve, Rob Westaway, Mark J. White, Tom S. White

Journal:

Quaternary Science Reviews

Year:

2007

Language:

english

File:

PDF, 696 KB

english, 2007

24

Differences in Drinking Patterns, Occupational Stress, and Exposure to Potentially Traumatic Events among Firefighters: Predictors of Smoking Relapse

Joseph W. VanderVeen, Suzy B. Gulliver, Sandra B. Morissette, Marc I. Kruse, Barbara W. Kamholz, Rose T. Zimering, Jeffrey Knight, Terence M. Keane

Journal:

The American Journal on Addictions

Year:

2012

Language:

english

File:

PDF, 496 KB

english, 2012

25

Effects of phlebotomy and autologous blood transfusion on oxygen transport in the racehorse

P. K. KNIGHT, SHIRLEY P. RAY, R. J. ROSE

Journal:

Equine Veterinary Journal

Year:

1999

Language:

english

File:

PDF, 431 KB

english, 1999

26

Evolutionary conservation of splice sites in sterile Cμ transcripts and of immunoglobulin heavy chain (IgH) enhancer region sequences

Rose G. Mage, Barbara A. Newman, Nagaradona Harindranath, Kenneth E. Bernstein, Robert S. Becker, Katherine L. Knight

Journal:

Molecular Immunology

Year:

1989

Language:

english

File:

PDF, 455 KB

english, 1989

27

A detailed comparison of measured and modeled wind-driven currents in the North Channel of the Irish Sea

Davies, Alan M., Hall, Philip, Howarth, M. John, Knight, Philip, Player, Rose

Journal:

Journal of Geophysical Research

Year:

2001

Language:

english

File:

PDF, 2.87 MB

english, 2001

28

Survey provides guidance for consortium's hydrologic measurement facility

Robinson, David, Selker, John, Bowden, Breck, Duncan, Jonathan, Durant, John, Hooper, Rick, Jacobs, Jennifer, Knight, Rose-Mary

Journal:

Eos Transactions American Geophysical Union

Year:

2006

Language:

english

File:

PDF, 162 KB

english, 2006

29

Characteristics of some auditory evoked potential (AEP) and field (AEF) responses (100 ms) in schizophrenia

Reeve, A., Maclin, E.L., Weinberger, D.R., Knight, J.E., Arthur, D., Rose, D.F.

Journal:

Schizophrenia Research

Year:

1991

Language:

english

File:

PDF, 106 KB

english, 1991

30

Commentaries on “The Immunoregulatory Disturbance in Autoimmune Thyroid Disease”

Knight, John G., Rose, N. R., Weetman, A. P., Volpé, Robert, Müller, Klaus, Oxholm, Peter, Madsen, Mimi Hóier, Wiik, Allan

Journal:

Year:

1988

Language:

english

File:

PDF, 1.20 MB

english, 1988

31

REVIEWS

JORDAN, BORIMIR, MOWAT, ROBERT J.C., ROSE, SUSAN, MOWAT, ROBERT J.C., GORSKI, RICHARD, KNIGHT, ROGER, COCK, RANDOLPH, FURGOL, EDWARD M., LAMBERT, ANDREW, SMITH, LIONEL A., GORSKI, RICHARD, GREENE, JAC

Journal:

The Mariner's Mirror

Year:

2006

Language:

english

File:

PDF, 186 KB

english, 2006

32

Hidden Markov model and support vector machine based decoding of finger movements using electrocorticography

Wissel, Tobias, Pfeiffer, Tim, Frysch, Robert, Knight, Robert T, Chang, Edward F, Hinrichs, Hermann, Rieger, Jochem W, Rose, Georg

Journal:

Journal of Neural Engineering

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

33

Pulmonary veno-occlusive disease after chemotherapy.

Knight, B K, Rose, A G

Journal:

Year:

1985

Language:

english

File:

PDF, 466 KB

english, 1985

34

No Right to Choose

Knight, Rose, Simms, Madeleine, Kingsbury, Ann, Stone, Raewin, Vorhaus, Gwyn, Fairweather, Eileen

Journal:

Feminist Review

Year:

1980

File:

PDF, 2.91 MB

1980

35

A Comparison of Two Measures to Assess Adult Attachment

West, Malcolm, Spreng, Sheila, Casares-Knight, Philippa, Rose, Sarah M., Leiper, Rob

Journal:

The Journal of Genetic Psychology

Year:

1998

Language:

english

File:

PDF, 531 KB

english, 1998

36

Mortality in Relation to the Functional Capacities of People with Disabilities Living at Home

Michael D. Warren and Rose Knight

Journal:

Journal of Epidemiology & Community Health

Year:

1982

Language:

english

File:

PDF, 596 KB

english, 1982

37

Psychological Distress Among School-Aged Children with and Without Intrauterine Cocaine Exposure: Perinatal Versus Contextual Effects

Richardson, Mark A., Grant-Knight, Wanda, Beeghly, Marjorie, Rose-Jacobs, Ruth, Chen, Clara A., Appugliese, Danielle P., Cabral, Howard J., Liebschutz, Jane M., Frank, Deborah A.

Journal:

Journal of Abnormal Child Psychology

Year:

2016

Language:

english

File:

PDF, 443 KB

english, 2016

38

Genome-wide analysis identifies a role for common copy number variants in specific language impairment

Simpson, Nuala H, Ceroni, Fabiola, Reader, Rose H, Covill, Laura E, Knight, Julian C, Nudel, R, Monaco, A P, Simonoff, E, Bolton, P F, Pickles, A, Slonims, V, Dworzynski, K, Everitt, A, Clark, A, Wats

Journal:

European Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 390 KB

english, 2015

39

Sexual Risk Taking Among HIV–Positive Injection Drug Users: Contexts, Characteristics, and Implications for Prevention

Knight, Kelly R., Purcell, David, Dawson–Rose, Carol, Halkitis, Perry N., Gomez, Cynthia A., Study Team, Seropositive Urban Injectors

Journal:

AIDS Education & Prevention

Year:

2005

Language:

english

File:

PDF, 173 KB

english, 2005

40

The Provision of Health Information to Stroke Patients Within an Acute Hospital Setting: What Actually Happens and How Do Patients Feel About It?

Knight, Kimberley, Worrall, Linda, Rose, Tanya

Journal:

Topics in Stroke Rehabilitation

Year:

2006

Language:

english

File:

PDF, 143 KB

english, 2006

41

HIV Intervention for Providers Study: A Randomized Controlled Trial of a Clinician-Delivered HIV Risk-Reduction Intervention for HIV-Positive People

Rose, Carol Dawson, Courtenay-Quirk, Cari, Knight, Kelly, Shade, Starley B, Vittinghoff, Eric, Gomez, Cynthia, Lum, Paula J, Bacon, Oliver, Colfax, Grant

Journal:

JAIDS Journal of Acquired Immune Deficiency Syndromes

Year:

2010

Language:

english

File:

PDF, 225 KB

english, 2010

42

THE MANAGEMENT OF ALLERGIC DISORDERS WITH ANTI-INFLAMMATORY STEROIDS

Rose, B., McGarry, E., Knight, A.

Journal:

Annals of the New York Academy of Sciences

Year:

2006

Language:

english

File:

PDF, 632 KB

english, 2006

43

Suicidal Ideation Among Urban Nine and Ten Year Olds

O'LEARY, CATHERINE C., FRANK, DEBORAH A., GRANT-KNIGHT, WANDA, BEEGHLY, MARJORIE, AUGUSTYN, MARILYN, ROSE-JACOBS, RUTH, CABRAL, HOWARD J., GANNON, KATHERINE

Journal:

Journal of Developmental & Behavioral Pediatrics

Year:

2006

Language:

english

File:

PDF, 101 KB

english, 2006

44

Minimally Invasive Techniques in Management of Hepatic Neuroendocrine Metastatic Disease

Liu, David M., Kennedy, Andrew, Turner, David, Rose, Steven C., Kee, Stephen T., Whiting, Samuel, Murthy, Ravi, Nutting, Charles, Heran, Manraj, Lewandowski, Robert, Knight, Jesse, Gulec, Seza, Salem,

Journal:

American Journal of Clinical Oncology

Year:

2009

Language:

english

File:

PDF, 565 KB

english, 2009

45

Die Branchenmässige Lohnstruktur der Industrie: Ein intertemporaler und internationaler Vergleichby Walther G. Hoffmann

Review by: Rose Knight

Journal:

Year:

1963

Language:

english

File:

PDF, 240 KB

english, 1963

46

Changes in the Occupational Structure of the Working Population

Journal:

Journal of the Royal Statistical Society Series A (General)

Year:

1967

Language:

english

File:

PDF, 1.27 MB

english, 1967

47

A Pilot Study Assessing PA Students’ Self-Assessment of Professionalism

Knight, Debra, Higgins, Rose, Moser, Sharon, Groh, Carla

Journal:

The Journal of Physician Assistant Education

Year:

2009

Language:

english

File:

PDF, 86 KB

english, 2009

48

Sexual Transmission Risk Behavior Reported Among Behaviorally Bisexual HIV-Positive Injection Drug-Using Men

Knight, Kelly R, Shade, Starley B, Purcell, David W, Rose, Carol Dawson, Metsch, Lisa R, Latka, Mary H, Latkin, Carl A, Gómez, Cynthia A

Journal:

JAIDS Journal of Acquired Immune Deficiency Syndromes

Year:

2007

Language:

english

File:

PDF, 117 KB

english, 2007

49

Cross-Sectional Study of Respiratory Symptoms, Spirometry, and Immunologic Sensitivity in Epoxy Resin Workers

Hines, Stella E., Barker, Elizabeth A., Robinson, Maura, Knight, Vijaya, Gaitens, Joanna, Sills, Michael, Duvall, Kirby, Rose, Cecile S.

Journal:

Clinical and Translational Science

Year:

2015

Language:

english

File:

PDF, 298 KB

english, 2015

50

Extracting duration information in a picture category decoding task using hidden Markov Models

Pfeiffer, Tim, Heinze, Nicolai, Frysch, Robert, Deouell, Leon Y, Schoenfeld, Mircea A, Knight, Robert T, Rose, Georg

Journal:

Journal of Neural Engineering

Year:

2016

Language:

english

File:

PDF, 1.81 MB

english, 2016